Vegan Gluten-Free Stuffed Peppers Recipe



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I use bright, colorful bell peppers stuffed with quinoa, chickpeas, and mushrooms to make my vegan gluten-free stuffed peppers. This is one of my favorite healthy dinners that is ready in just under 1 hour, packed with savory herbs, tender vegetables, and plenty of plant-based protein.

Grey plate with tri colored quinoa stuffed peppers

Vegan gluten-free stuffed peppers are one of my favorite vegetables to build a meal around. Their natural sweetness becomes even richer as they roast, making them irresistible even to the pickiest eaters. And if my family happens to be craving this dish on a Tuesday, I work taco Tuesday into the meal and make taco stuffed peppers instead. If you love single-serving meals, be sure to try this recipe soon.

I am no stranger to stuffing vegetables; I grew up eating yemista Greek stuffed tomatoes and peppers, which are delicious, but I started wishing it contained a little more protein. After some experimentation, quinoa and chickpeas turned out to be the combination everyone loved and requested again and again. The first time I served it to some of my other family members, they were expecting traditional Greek flavors, but were pleasantly surprised by the Italian-inspired flavors and varying textures.

Colorful meals always catch my kids’ attention, and these vegan gluten-free stuffed peppers deliver more than just a beautiful presentation. As a health coach, I appreciate that every serving includes fiber-rich quinoa, protein-packed chickpeas, and plenty of vegetables that help create a balanced meal. They are naturally vegan and gluten-free, making them an easy dinner to share with almost anyone around my table. 

Everything begins with preparing the peppers. Once that is done, I pulse my chickpeas and mushrooms separately, then saute my garlic, mushrooms, and tomatoes. Once everything is soft and fragrant, I mix the quinoa and chickpeas with the rest of the filling until they are heated through. Then I pack each pepper generously, add cheese, replace the tops, and bake until the peppers are tender with caramelized edges. 

My boys have grown up eating these stuffed peppers, and they show no signs of growing bored with them. Great news for me, but it also means I am always trying to find new ways to make them interesting. A few weeks ago, I was meal planning, and I asked my boys what they wanted for breakfast on the weekend, when my eldest said stuffed peppers, and his brothers were in strong agreement. This was new. I asked if they would not prefer to have it for dinner, but they insisted that we make the stuffed peppers with some vegan scrambled eggs instead of chickpeas. I was intrigued. And just like that, we had a new breakfast favorite. Ha! When you make these stuffed peppers, let me know what fun fillings you plan on using.

🥘 Ingredients

I use a mix of simple pantry staples and fresh vegetables for my vegan gluten-free stuffed peppers. This is what I need to get a hearty, flavorful, and nourishing outcome:

Ingredients used for stuffed peppers in bowls and on the wooden tableIngredients used for stuffed peppers in bowls and on the wooden table

Bell peppers: I like using medium peppers, and choose red, orange, or yellow for their naturally sweet flavor. 

Cooked quinoa: Fluffy cooked quinoa adds plant-based protein and a hearty texture. You can make pressure cooker quinoa, or follow this guide on how to cook quinoa on the stove.

Chickpeas: I pulse cooked chickpeas until they form a crumble to create a hearty filling with plenty of plant-based protein.

Mushrooms: Finely chopped mushrooms add savory umami flavor while helping keep the filling moist.

Fresh tomatoes: Chopped fresh tomatoes add freshness with a sweet and lightly acidic flavor. 

Garlic: This creates a rich savory base. 

Herbs: Fresh parsley and dried thyme add color and an earthy flavor which pairs well with the vegetables.

Sea salt: I use salt to bring all the flavors together. 

Olive oil or vegetable broth: Either works for sauteing the vegetables. 

Dairy-free cheese: I occasionally sprinkle a little on top before baking for a golden finish.

🔪 How To Make

Preparing vegan gluten-free stuffed peppers is surprisingly simple. This is how I transform basic ingredients into a complete meal:

Prepare the peppers: I preheat the oven to 350F, slice the tops off the peppers, and remove the seeds and membranes.

White baking dish with empty raw pepper with no tops in itWhite baking dish with empty raw pepper with no tops in it

Chop the chickpeas: Next, I pulse the chickpeas in my food processor until crumbly.

Top view of food processor with chopped chickpeasTop view of food processor with chopped chickpeas

Chop the mushrooms: Then, I remove the chickpeas and add the mushrooms to the processor, and pulse them until they too are finely ground but still have texture.

Top view of food processor with chopped mushroomsTop view of food processor with chopped mushrooms

Saute aromatics and vegetables: I saute the garlic in some oil or broth for about 2 minutes, then cook the mushrooms for 5 minutes, stir in the tomatoes, parsley, thyme, and salt, and cook for another 5 minutes.

Wooden spoon sautéing tomatoes, mushrooms and herbsWooden spoon sautéing tomatoes, mushrooms and herbs

Add in quinoa and chickpeas: After that, I mix in the quinoa and pulsed chickpeas, stirring until everything is distributed and heated through.

Spoon mixing quinoa with chopped mushrooms and chickpeas in a panSpoon mixing quinoa with chopped mushrooms and chickpeas in a pan

Fill and bake: I fill each pepper generously, add dairy-free cheese if I am using it, replace the tops, and bake for 30-35 minutes until the peppers are tender and lightly browned.

Top view of stuffed peppers in a white baking dishTop view of stuffed peppers in a white baking dish

My #1 Secret Tip for this vegan gluten-free stuffed peppers recipe is to cook off all the moisture from the mushrooms before adding the remaining ingredients. I never rush this step since concentrated mushrooms create a richer filling and prevent watery peppers after baking.

Other Tips To Keep In Mind:

  • Choose similar upright peppers: I pick peppers that are close in size so they finish baking at the same time. It is also important to try to use peppers that stand upright on their own, as this allows for easier baking without the risk of spilling.
  • Pack firmly: I gently press the filling into each pepper so every bite stays together after baking. 
  • Trim if needed: If a pepper wobbles, I shave a very thin slice from the bottom without exposing the cavity. This helps steady the pepper.
  • Leave the tops: I never throw out the tops, as they make for a stunning presentation, but also help keep the filling from drying out as it bakes. 
  • Rest before serving: I let the peppers cool for about 5 minutes before serving so the filling has time to settle.
Fork getting a bite out of an orange quinoa stuffed pepperFork getting a bite out of an orange quinoa stuffed pepper

📖 Variations

The possibilities with vegan gluten-free stuffed peppers are almost endless. These are just 3 of the combinations I make for my family:

Mexican stuffed peppers: I replace 1 cup of quinoa with black beans, or 1 cup of vegan Mexican rice. When I am sauteing the filling, I add in 1 teaspoon cumin, 1/2 teaspoon chili powder, and stir through fresh chopped cilantro. My kids love this version with a side of vegan nacho cheese sauce. 

Extra greens: During the last minute of cooking my filling, I stir in 2 cups of chopped baby spinach. This adds even more nutrients, and this spinach melts into the filling. If I want even more greens, sometimes I add chopped up broccoli florets in too, which my husband loves. 

Leftover stuffing: Whenever I have leftovers like tofu fried rice, I like mixing through some vegan cheese along with extra veg and using it to stuff the peppers instead of making a new filling. I never let grains or leftovers like my gluten-free cornbread stuffing go to waste as long as I have bell peppers in my kitchen. 

🍽 Serving Suggestions

If you want these vegan gluten-free stuffed peppers to be part of a more substantial meal, I recommend serving them with complementary Italian dishes like spaghetti with tofu meatballs and a drizzle of easy pesto without pine nuts as a dressing. 

The last time I made these stuffed peppers for friends, we were enjoying the summer weather and had tapas and snacks outside. Since the festivities included a few Italian margaritas, I knew the peppers would be welcome after an afternoon of snacking on gluten free biscotti with apricots and walnuts. I served it with gluten free focaccia and a spinach and arugula salad with vegan Italian dressing. It is strange how an afternoon relaxing in the sun can make you so hungry. There were zero leftovers. 

🧊 Storing And ♨️ Reheating

Refrigeration: I store leftover peppers in an airtight container in the refrigerator for up to 4 days. 

Freezing: I freeze baked or unbaked stuffed peppers in a freezer-safe container for up to 3 months.

Reheating: If frozen, I thaw the peppers in the refrigerator overnight, then warm individual peppers in the microwave for 2-3 minutes. Or reheat several peppers in a 350F oven for 15-20 minutes until heated through.

❓Recipe FAQs

What can I do if my peppers will not stand upright?

If my peppers still do not stand upright even after trimming them, I either place them in large muffin trays or create a secure base using foil or scrunched-up parchment paper. This holds them in place but may prevent the lower parts from caramelizing as much.

Why is my filling too dry?

The filling can dry out if the quinoa has absorbed too much moisture before mixing or if the pepper bakes longer than needed. When the mixture looks a little dry, I stir in 1 or 2 tablespoons of vegetable broth before stuffing the peppers to restore the perfect texture.

Can I use leftover quinoa instead of freshly cooked quinoa?

Yes, I make these stuffed peppers with leftover quinoa all the time, and it works wonderfully. Cold quinoa from the refrigerator is a great option since it has had time to firm up, making the filling a little easier to mix and spoon into the pepper. I add broth if the quinoa seems a little dry. Freshly cooked quinoa creates a slightly lighter, fluffier filling.

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Vegan Gluten-Free Stuffed Peppers

I use bright, colorful bell peppers stuffed with quinoa, chickpeas, and mushrooms to make my vegan gluten-free stuffed peppers. This is one of my favorite healthy dinners that is ready in just under 1 hour, packed with savory herbs, tender vegetables, and plenty of plant-based protein.

Prep Time20 minutes

Cook Time30 minutes

Total Time50 minutes

Course: Main Course

Cuisine: American, Italian

Diet: Gluten Free, Vegan, Vegetarian

Servings: 8

Calories: 173kcal

  • My #1 Secret Tip for this vegan gluten-free stuffed peppers recipe is to cook off all the moisture from the mushrooms before adding the remaining ingredients. I never rush this step since concentrated mushrooms create a richer filling and prevent watery peppers after baking. 
  • Choose similar upright peppers: I pick peppers that are close in size so they finish baking at the same time. It is also important to try to use peppers that stand upright on their own, as this allows for easier baking without the risk of spilling.  
  • Pack firmly: I gently press the filling into each pepper so every bite stays together after baking. 
  • Trim if needed: If a pepper wobbles, I shave a very thin slice from the bottom without exposing the cavity. This helps steady the pepper.
  • Leave the tops: I never throw out the tops, as they make for a stunning presentation and also help keep the filling from drying out as it bakes. 
  • Rest before serving: I let the peppers cool for about 5 minutes before serving so the filling has time to settle.

Calories: 173kcal | Carbohydrates: 31g | Protein: 7g | Fat: 3g | Saturated Fat: 1g | Sodium: 364mg | Potassium: 656mg | Fiber: 8g | Sugar: 7g | Vitamin A: 4206IU | Vitamin C: 160mg | Calcium: 45mg | Iron: 3mg